BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C06SP1|AL428873
(822 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1503 1589 0.0
>3x_Contig1503
Length = 10719
Score = 1589 bits (794), Expect = 0.0
Identities = 809/822 (98%)
Strand = Plus / Plus
Query: 1 gatcacaagtggaggtcaattctcctaatggagacccgttgctggatccagaaagtaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gatcacaagtggaggtcaattctcctaatggagacccgttgctggatccagaaagtaatg 697
Query: 61 tagaataawaatggtcaawtattaatgaacttgcttatgatggagaaactgcatcgaact 120
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tagaataaaaatggtcaaatattaatgaacttgcttatgatggagaaactgcatcgaact 757
Query: 121 tcgaaaacaaattttgatatcgtgatagaagtwaacgaccactgtcgaattggtaacagt 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 758 tcgaaaacaaattttgatatcgtgatagaagtaaacgaccactgtcgaattggtaacagt 817
Query: 181 agaaaggttcatwwhagttaactagagaggaggtctatatattatctgttacagtaaata 240
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 agaaaggttcaaaaaagttaactagagaggaggtctatatattatctgttacagtaaata 877
Query: 241 gaataaatttgtttaahaagtgagtggtttcagtatgaatattacaatcagaacttaaha 300
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 878 gaataaatttgtttaaaaagtgagtggtttcagtatgaatattacaatcagaacttaaaa 937
Query: 301 tgctccatagggactgtctcttgacatggatgcagaggtaggttattttttcttgggagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 tgctccatagggactgtctcttgacatggatgcagaggtaggttattttttcttgggagc 997
Query: 361 cttttcctataagcmggtttatagtgcattgaagatgctggtgcggagtttagccctgca 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 cttttcctataagcaggtttatagtgcattgaagatgctggtgcggagtttagccctgca 1057
Query: 421 ctcctttggctatttccgtatgatgctggaccagttccgatggagaattcagggtttgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 ctcctttggctatttccgtatgatgctggaccagttccgatggagaattcagggtttgat 1117
Query: 481 tgthataagahatctgatgcagacggaccagccgaatacggaggttgtggttgttgtggt 540
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 tgtaataagaaatctgatgcagacggaccagccgaatacggaggttgtggttgttgtggt 1177
Query: 541 tgttgttgctgtactggtagtggcggagggtggtagtatccttgttgcggacctgcttgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1178 tgttgttgctgtactggtagtggcggagggtggtagtatccttgttgcggacctgcttgg 1237
Query: 601 ttaggaagtggagggtaatactgtcccccgacaactggcggttgcgtaggatgcatacca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1238 ttaggaagtggagggtaatactgtcccccgacaactggcggttgcgtaggatgcatacca 1297
Query: 661 tttggmaccattccttgagccatagcaggattttgtacttgaccttgtaattggttctgt 720
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1298 tttggaaccattccttgagccatagcaggattttgtacttgaccttgtaattggttctgt 1357
Query: 721 agtggaccatgagtaggagggatatactgtacaccacctcttccctggtagtaatttgga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1358 agtggaccatgagtaggagggatatactgtacaccacctcttccctggtagtaatttgga 1417
Query: 781 ttgatacctctttgagagaccgatgtgaactgagagtcatcg 822
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1418 ttgatacctctttgagagaccgatgtgaactgagagtcatcg 1459
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4503
Number of Sequences: 1807
Number of extensions: 4503
Number of successful extensions: 150
Number of sequences better than 1.0e-20: 1
length of query: 822
length of database: 10,358,551
effective HSP length: 16
effective length of query: 806
effective length of database: 10,329,639
effective search space: 8325689034
effective search space used: 8325689034
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)